All modules for which code is available
- seqgra.comparator.comparator
- seqgra.comparator.curvetablecomparator
- seqgra.comparator.fietablecomparator
- seqgra.comparator.prcomparator
- seqgra.comparator.roccomparator
- seqgra.comparator.tablecomparator
- seqgra.constants
- seqgra.evaluator.evaluator
- seqgra.evaluator.explainer.backprop
- seqgra.evaluator.explainer.deeplift
- seqgra.evaluator.explainer.ebp.ebp
- seqgra.evaluator.explainer.ebp.functions
- seqgra.evaluator.explainer.feedback
- seqgra.evaluator.explainer.gradcam
- seqgra.evaluator.explainer.occlusion
- seqgra.evaluator.explainer.path
- seqgra.evaluator.explainer.patterns
- seqgra.evaluator.explainer.perturbation
- seqgra.evaluator.explainer.real_time.pytorch_fixes
- seqgra.evaluator.explainer.real_time.resnet_encoder
- seqgra.evaluator.explainer.real_time.saliency_eval
- seqgra.evaluator.gradientbased.abstractdifferencegradientevaluator
- seqgra.evaluator.gradientbased.abstractgradientevaluator
- seqgra.evaluator.gradientbased.contrastiveexcitationbackpropevaluator
- seqgra.evaluator.gradientbased.deconvevaluator
- seqgra.evaluator.gradientbased.deepliftevaluator
- seqgra.evaluator.gradientbased.differencegradientevaluator
- seqgra.evaluator.gradientbased.ebphelper
- seqgra.evaluator.gradientbased.excitationbackpropevaluator
- seqgra.evaluator.gradientbased.feedbackevaluator
- seqgra.evaluator.gradientbased.gradcamgradientevaluator
- seqgra.evaluator.gradientbased.gradientbasedevaluator
- seqgra.evaluator.gradientbased.gradientevaluator
- seqgra.evaluator.gradientbased.gradientxinputevaluator
- seqgra.evaluator.gradientbased.guidedbackpropevaluator
- seqgra.evaluator.gradientbased.integratedgradientevaluator
- seqgra.evaluator.gradientbased.nonlinearintegratedgradientevaluator
- seqgra.evaluator.gradientbased.saliencyevaluator
- seqgra.evaluator.gradientbased.smoothgradevaluator
- seqgra.evaluator.metricsevaluator
- seqgra.evaluator.predictevaluator
- seqgra.evaluator.prevaluator
- seqgra.evaluator.rocevaluator
- seqgra.evaluator.sis.sis
- seqgra.evaluator.sisevaluator
- seqgra.idresolver
- seqgra.learner.bayes.bayeshelper
- seqgra.learner.bayes.bayeslearner
- seqgra.learner.dna
- seqgra.learner.dnahelper
- seqgra.learner.learner
- seqgra.learner.protein
- seqgra.learner.proteinhelper
- seqgra.learner.tensorflow.kerascallback
- seqgra.learner.tensorflow.kerashelper
- seqgra.learner.tensorflow.keraslearner
- seqgra.learner.torch.torchdataset
- seqgra.learner.torch.torchhelper
- seqgra.learner.torch.torchlearner
- seqgra.misc
- seqgra.model.data.alphabetdistribution
- seqgra.model.data.background
- seqgra.model.data.condition
- seqgra.model.data.datadefinition
- seqgra.model.data.datageneration
- seqgra.model.data.operation
- seqgra.model.data.rule
- seqgra.model.data.sequenceelement
- seqgra.model.data.spacingconstraint
- seqgra.model.model.architecture
- seqgra.model.model.modeldefinition
- seqgra.model.model.operation
- seqgra.parser.datadefinitionparser
- seqgra.parser.modeldefinitionparser
- seqgra.parser.xmldatadefinitionparser
- seqgra.parser.xmlhelper
- seqgra.parser.xmlmodeldefinitionparser
- seqgra.schema
- seqgra.seqgra
- seqgra.seqgraa
- seqgra.seqgrae
- seqgra.seqgras
- seqgra.simulator.backgroundgenerator
- seqgra.simulator.example
- seqgra.simulator.examplegenerator
- seqgra.simulator.heatmap.heatmap
- seqgra.simulator.motif.ess
- seqgra.simulator.motif.kld
- seqgra.simulator.motif.motifinfo
- seqgra.simulator.simulator
- seqgra.writer.datadefinitionwriter
- seqgra.writer.modeldefinitionwriter
- seqgra.writer.xmldatadefinitionwriter
- seqgra.writer.xmlmodeldefinitionwriter